Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Tter_0373PFAM: protein of unknown function DUF101; KEGG: cbd:CBUD_1267 hypothetical cytosolic protein. (142 aa)    
Predicted Functional Partners:
rtcB
PFAM: protein of unknown function UPF0027; KEGG: nmu:Nmul_A0903 hypothetical protein; Belongs to the RtcB family.
 
 0.991
Tter_0372
PFAM: heat shock protein Hsp20; KEGG: afw:Anae109_3080 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
       0.536
Tter_2376
Hypothetical protein; KEGG: sat:SYN_00043 gluconate kinase.
   
    0.523
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.514
Tter_0853
PFAM: dienelactone hydrolase; KEGG: tgr:Tgr7_1689 hypothetical protein.
  
    0.445
Tter_0301
KEGG: bxe:Bxe_A3924 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; PAS domain containing protein.
   
    0.414
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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