Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_0385KEGG: xca:xccb100_3125 serine/threonine phosphoprotein phosphatase. (269 aa)    
Predicted Functional Partners:
Tter_0991
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bcr:BCAH187_A3910 serine/threonine protein kinase.
  
 
 0.931
Tter_0547
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: hypothetical protein.
  
 0.762
Tter_0395
SMART: Ankyrin; KEGG: bcz:pE33L466_0197 ankyrin repeat-containing protein.
 
 0.761
Tter_0750
PFAM: histone deacetylase superfamily; KEGG: bcb:BCB4264_A4778 acetoin utilization protein AcuC.
   
 
 0.725
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.660
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   0.657
Tter_2418
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_2282 oxidoreductase, zinc-binding dehydrogenase family.
  
 
   0.604
Tter_1161
PFAM: formyl transferase domain protein; KEGG: erg:ERGA_CDS_02000 methionyl-tRNA formyltransferase.
  
   0.590
Tter_2648
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: mgm:Mmc1_2016 helicase domain protein.
 
 
 0.570
Tter_2695
TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; KEGG: gsu:GSU2749 NOL1/NOP2/sun family protein.
  
  
 0.554
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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