STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0397PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce5041 trehalose/maltose-binding protein. (522 aa)    
Predicted Functional Partners:
Tter_0398
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce5040 trehalose/maltose transporter permease protein.
  0.984
Tter_0399
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce5039 trehalose/maltose transport system, permease protein.
 
  0.984
Tter_2489
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2012 binding-protein-dependent transport systems inner membrane component.
  
   0.756
Tter_2490
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2013 binding-protein-dependent transport systems inner membrane component.
  
   0.719
Tter_2052
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter.
  
   0.702
Tter_2053
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02026 multiple sugar transport system permease protein.
  
   0.656
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
  
   0.607
Tter_0206
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3847 ABC transporter (permease).
  
   0.580
Tter_0207
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3846 ABC transporter (permease).
  
   0.580
Tter_2702
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1761 hypothetical protein.
  
   0.576
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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