STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0402PFAM: NMT1/THI5 like domain protein; KEGG: rpb:RPB_3120 twin-arginine translocation pathway signal. (360 aa)    
Predicted Functional Partners:
Tter_0403
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0643 putative transport system permease protein.
 
  
 0.961
Tter_1221
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4400 putative transmembrane component of ABC transporter.
 
  
 0.867
Tter_2835
Diguanylate cyclase; KEGG: aha:AHA_4237 GAF domain/GGDEF domain/EAL domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
 
      0.860
Tter_0231
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7951 ABC transporter, permease.
 
  
 0.847
Tter_1220
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3318 ABC transporter ATP-binding protein.
 
  
 0.833
Tter_2192
Response regulator receiver modulated diguanylate cyclase; KEGG: azo:azo2059 REC/GGDEF-domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver.
 
      0.695
Tter_0203
KEGG: ppd:Ppro_0502 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
      0.609
Tter_1719
KEGG: glo:Glov_1844 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein.
 
    
 0.579
Tter_2226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 aliphatic sulfonate ABC transporter permease.
 
  
 0.560
Tter_0230
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt2573 putative ATP-binding ABC transporter protein.
 
  
 0.555
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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