STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0405PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL110512 hypothetical protein. (300 aa)    
Predicted Functional Partners:
Tter_0406
PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: bha:BH1248 NADH-dependent dyhydrogenase.
       0.709
Tter_1177
PFAM: sulfotransferase; KEGG: rde:RD1_3840 hypothetical protein.
  
   
 0.657
Tter_0990
Hypothetical protein.
 
    0.549
Tter_2571
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
 
  
0.484
Tter_2595
PFAM: ADP-ribosylation/Crystallin J1; KEGG: sec:SC3958 putative ADP-ribosylglycohydrolase.
  
     0.478
Tter_0404
KEGG: hypothetical protein.
       0.465
Tter_1921
PFAM: protein of unknown function DUF1470; KEGG: bcy:Bcer98_2131 hypothetical protein.
  
     0.442
Tter_1207
PFAM: ErfK/YbiS/YcfS/YnhG family protein; SMART: Beta-propeller repeat TECPR; KEGG: beta-propeller repeat TECPR.
  
    0.403
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.