STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0428PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90124 putative transmembrane binding- protein-dependent transporter. (310 aa)    
Predicted Functional Partners:
Tter_0429
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG.
   0.948
Tter_2207
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease.
 
   0.833
Tter_1289
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL1659 putative transmembrane component of ABC transporter.
 
   0.832
Tter_2528
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xca:xccb100_1976 permease component of a sugar import ABC transporter.
 
   0.830
Tter_2301
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease.
 
   0.829
Tter_1961
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90190 putative permease component of ABC transporter.
 
   0.825
Tter_2023
Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease).
 
   0.825
Tter_2293
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00301 sugar ABC transporter, permease protein.
 
   0.823
Tter_2616
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component.
 
   0.823
Tter_2572
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7213 ABC transporter, permease protein.
 
   0.818
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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