Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tter_0460Hypothetical protein. (371 aa)    
Predicted Functional Partners:
Tter_0462
Hypothetical protein; KEGG: pca:Pcar_2141 ABC-type transport system, putative ATPase subunit.
 
     0.897
Tter_0459
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sus:Acid_5737 ECF subfamily RNA polymerase sigma-24 factor.
 
 
 0.887
Tter_0461
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_0670 ABC transporter related.
 
    0.822
Tter_2715
KEGG: sus:Acid_0589 hypothetical protein.
  
     0.594
Tter_0457
Hypothetical protein.
       0.525
Tter_0458
PFAM: Amidase; KEGG: rpb:RPB_0220 amidase; Belongs to the amidase family.
       0.525
Tter_0159
KEGG: aba:Acid345_1209 hypothetical protein.
  
     0.470
Tter_1376
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; KEGG: glo:Glov_2492 penicillin-binding protein 2.
  
     0.465
Tter_1049
PFAM: integrase domain protein SAM domain protein; KEGG: noc:Noc_0687 phage integrase; Belongs to the 'phage' integrase family.
  
     0.442
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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