STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0482PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2797 ABC transporter, ATPase subunit. (247 aa)    
Predicted Functional Partners:
Tter_0476
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4381 ABC transporter related.
    
0.933
Tter_2673
PFAM: ABC transporter related; LytTr DNA-binding region; SMART: AAA ATPase; KEGG: bce:BC5286 transcriptional regulator.
 
    0.719
Tter_0973
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bca:BCE_4067 sugar ABC transporter, ATP- binding protein.
 
    
0.638
Tter_1320
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.613
Tter_2492
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_2015 ABC transporter related; Belongs to the ABC transporter superfamily.
 
    
0.579
Tter_0588
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_1505 leucine/isoleucine/valine transport system ATP-binding protein.
     
0.490
Tter_2175
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU34700 hypothetical protein.
   
0.477
Tter_0462
Hypothetical protein; KEGG: pca:Pcar_2141 ABC-type transport system, putative ATPase subunit.
  
 
 0.453
Tter_1670
Hypothetical protein; KEGG: maq:Maqu_3075 nitrous-oxide reductase, NosY component.
  
 
 0.453
Tter_1740
KEGG: scl:sce7370 hypothetical protein.
  
 
 0.453
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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