STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0532PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bsu:BSU06300 spore coat protein (outer). (536 aa)    
Predicted Functional Partners:
Tter_0531
KEGG: nha:Nham_0988 hypothetical protein.
       0.773
Tter_2238
PFAM: multicopper oxidase type 3; multicopper oxidase type 1; blue (type 1) copper domain protein; multicopper oxidase type 2; KEGG: hypothetical protein.
 
  
0.698
Tter_1118
PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: bsu:BSU03950 hypothetical protein.
 
   
 0.537
Tter_2405
KEGG: ade:Adeh_0026 hypothetical protein.
  
     0.470
Tter_2078
PFAM: permease; KEGG: bph:Bphy_1637 permease.
  
  
 0.467
Tter_2101
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mxa:MXAN_0345 putative N-acetylmuramoyl-L- alanine amidase.
  
   
 0.467
Tter_0530
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: hch:HCH_02655 ATP-dependent transcriptional regulator.
       0.463
tatC
Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.455
Tter_2194
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
  
 
 0.421
Tter_0247
PFAM: blue (type 1) copper domain protein; KEGG: aba:Acid345_1788 plastocyanin-like protein.
   
 
 0.402
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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