STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0535PFAM: YceI family protein; KEGG: sus:Acid_1354 YceI family protein; Belongs to the UPF0312 family. (223 aa)    
Predicted Functional Partners:
Tter_0253
PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: THUMPD3; THUMP domain containing 3.
  
     0.616
Tter_0534
2-alkenal reductase; KEGG: aba:Acid345_3298 peptidase S1C, Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; Peptidase S7 flavivirus helicase (NS3); PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein.
  
    0.564
Tter_0803
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bha:BH0078 stage II sporulation protein E.
  
     0.543
Tter_2600
PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; transcriptional regulator domain protein; SMART: Tetratricopeptide domain protein; KEGG: dac:Daci_4815 ATP-dependent transcription regulator LuxR.
  
     0.522
Tter_0632
PFAM: Dynamin family protein; Miro domain protein; GTP-binding protein HSR1-related; KEGG: hypothetical protein.
  
     0.516
Tter_1391
Putative transcriptional regulator; PFAM: AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: xca:xccb100_0556 hypothetical protein.
 
     0.477
Tter_1036
Membrane-bound mannosyltransferase-like protein; KEGG: bba:Bd1123 putative membrane-bound mannosyltransferase.
  
     0.448
Tter_0404
KEGG: hypothetical protein.
  
     0.441
Tter_2278
PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; Fibronectin type III domain protein; SMART: alpha amylase catalytic sub domain; Fibronectin type III domain protein; KEGG: vvu:VV1_2227 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
  
    0.431
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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