STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0585PFAM: Extracellular ligand-binding receptor; KEGG: acr:Acry_3096 extracellular ligand-binding receptor. (453 aa)    
Predicted Functional Partners:
Tter_0587
PFAM: inner-membrane translocator; KEGG: acr:Acry_3094 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
Tter_0586
PFAM: inner-membrane translocator; KEGG: dal:Dalk_3947 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
Tter_0588
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_1505 leucine/isoleucine/valine transport system ATP-binding protein.
 
 
 0.997
Tter_0589
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_4384 ABC transporter related.
 
 
 0.996
Tter_0301
KEGG: bxe:Bxe_A3924 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; PAS domain containing protein.
  
  
 0.539
Tter_2194
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
  
 
 0.537
Tter_0590
Hypothetical protein.
       0.529
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
     
 0.527
Tter_0584
PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: rec:RHECIAT_CH0003125 putative sulfite oxidase protein.
       0.518
Tter_0591
PFAM: Heavy metal transport/detoxification protein; KEGG: bha:BH0557 copper-transporting ATPase.
       0.509
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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