STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0590Hypothetical protein. (81 aa)    
Predicted Functional Partners:
Tter_0588
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_1505 leucine/isoleucine/valine transport system ATP-binding protein.
       0.773
Tter_0589
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_4384 ABC transporter related.
       0.773
Tter_0587
PFAM: inner-membrane translocator; KEGG: acr:Acry_3094 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
       0.746
Tter_0591
PFAM: Heavy metal transport/detoxification protein; KEGG: bha:BH0557 copper-transporting ATPase.
       0.741
Tter_0586
PFAM: inner-membrane translocator; KEGG: dal:Dalk_3947 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.721
Tter_0585
PFAM: Extracellular ligand-binding receptor; KEGG: acr:Acry_3096 extracellular ligand-binding receptor.
       0.529
Tter_0592
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_0704 luciferase family protein.
       0.505
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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