STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0605PFAM: protein of unknown function UPF0157; KEGG: lpp:lpp1089 hypothetical protein. (185 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
    
 0.910
Tter_0606
PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003425 probable acetyltransferase protein.
  
    0.777
Tter_0603
PFAM: inositol monophosphatase; KEGG: ppd:Ppro_0018 inositol monophosphatase.
  
    0.727
Tter_0604
KEGG: mxa:MXAN_5580 hypothetical protein.
  
    0.725
Tter_0607
Hypothetical protein.
       0.539
Tter_0608
Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
       0.539
Tter_1273
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.511
Tter_0612
KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide- binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.506
Tter_0609
Hypothetical protein.
       0.504
Tter_0610
PFAM: Polysulphide reductase NrfD; KEGG: eca:ECA1878 nitrite reductase complex component.
       0.504
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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