STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0633Hypothetical protein. (385 aa)    
Predicted Functional Partners:
Tter_2101
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mxa:MXAN_0345 putative N-acetylmuramoyl-L- alanine amidase.
 
     0.769
Tter_2530
PFAM: glycoside hydrolase family 39; KEGG: cak:Caul_3132 xylan 1,4-beta-xylosidase.
 
 
   0.677
Tter_1564
TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: acp:A2cp1_0344 M6 family metalloprotease domain protein.
  
     0.666
Tter_2109
PFAM: Carbohydrate-binding family 9; KEGG: bph:Bphy_6730 hypothetical protein.
   
   0.632
Tter_0634
KEGG: bvi:Bcep1808_0005 hypothetical protein.
       0.539
Tter_0632
PFAM: Dynamin family protein; Miro domain protein; GTP-binding protein HSR1-related; KEGG: hypothetical protein.
       0.465
Tter_0631
KEGG: sal:Sala_1852 hypothetical protein.
       0.457
Tter_2188
PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside phosphotransferase; KEGG: ott:OTT_0547 putative streptomycin-6- phosphotransferase.
  
     0.408
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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