STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0636PFAM: LOR/SDH bifunctional protein conserved domain protein; KEGG: pca:Pcar_2163 hypothetical protein. (450 aa)    
Predicted Functional Partners:
Tter_0637
PFAM: sodium/calcium exchanger membrane region; KEGG: dvm:DvMF_1109 sodium/calcium exchanger membrane region.
       0.598
Tter_2123
KEGG: sfu:Sfum_3568 hypothetical protein.
  
     0.480
Tter_0620
KEGG: sfu:Sfum_3568 hypothetical protein.
  
     0.463
Tter_1875
Hypothetical protein.
  
     0.418
Tter_0638
Hypothetical protein.
       0.414
Tter_0635
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bsu:BSU33660 hypothetical protein.
       0.403
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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