STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0695PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0658 ABC transporter-related protein. (328 aa)    
Predicted Functional Partners:
Tter_1853
PFAM: ABC-2 type transporter; KEGG: pmr:PMI0616 ABC transporter, permease protein.
    0.825
Tter_2579
PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A2507 putative ABC transporter, permease protein.
 
    0.805
Tter_2250
PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein.
    0.772
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
    0.674
Tter_0697
PFAM: metallophosphoesterase; KEGG: pca:Pcar_1060 DNA repair exonuclease.
  
    0.637
Tter_0696
PFAM: SMC domain protein; KEGG: sun:SUN_0726 DNA double-strand break repair protein.
       0.636
Tter_0462
Hypothetical protein; KEGG: pca:Pcar_2141 ABC-type transport system, putative ATPase subunit.
  
 
 0.453
Tter_1670
Hypothetical protein; KEGG: maq:Maqu_3075 nitrous-oxide reductase, NosY component.
  
 
 0.453
Tter_1740
KEGG: scl:sce7370 hypothetical protein.
  
 
 0.453
Tter_0698
Nucleotide sugar dehydrogenase; KEGG: sfu:Sfum_3370 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol- 3-phosphate dehydrogenase domain protein.
       0.448
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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