STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0807PFAM: TrkA-N domain protein; KEGG: abo:ABO_0128 potassium transporter peripheral membrane component. (137 aa)    
Predicted Functional Partners:
Tter_0806
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pla:Plav_3126 potassium transporter peripheral membrane component.
 
    
0.801
Tter_0628
H(+)-transporting two-sector ATPase; PFAM: cation transporter; KEGG: asa:ASA_0268 potassium uptake protein KtrB.
  
 
 0.797
Tter_0808
PFAM: metallophosphoesterase; KEGG: sus:Acid_0953 metallophosphoesterase.
       0.732
Tter_0131
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: scl:sce2941 molybdopterin-converting factor chain 2.
   
    0.540
Tter_0809
Hypothetical protein.
       0.528
Tter_0810
Hypothetical protein; KEGG: pol:Bpro_5552 late embryogenesis abundant protein.
       0.499
Tter_1341
Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.499
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
   
    0.456
Tter_0334
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: glo:Glov_1076 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.437
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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