STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0829PFAM: extracellular solute-binding protein family 1; KEGG: mes:Meso_4520 extracellular solute-binding protein, family 1. (504 aa)    
Predicted Functional Partners:
Tter_0831
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG.
 
   0.871
Tter_0830
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
   0.782
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
   0.703
Tter_2646
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease).
  
   0.689
Tter_2616
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component.
  
   0.680
Tter_2572
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7213 ABC transporter, permease protein.
  
   0.630
Tter_2024
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter, permease protein.
 
   0.622
Tter_2645
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1925 sugar transport system (permease).
 
   0.622
Tter_1963
PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL2325 putative solute-binding component of ABC transporter.
  
     0.568
Tter_2615
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
   0.567
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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