STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0840Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (267 aa)    
Predicted Functional Partners:
Tter_0839
Alpha,alpha-trehalose-phosphate synthase (UDP- forming); PFAM: glycosyl transferase family 20; KEGG: pca:Pcar_3112 trehalose-6-phosphate synthase.
 
 0.999
Tter_1718
PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_0781 glycosyl transferase, group 1 family protein.
 
 0.944
Tter_0330
KEGG: mxa:MXAN_3684 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
 
 0.916
Tter_2035
PFAM: glycoside hydrolase 15-related; KEGG: noc:Noc_1617 glycoside hydrolase.
 
   
 0.766
Tter_0841
PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: pca:Pcar_0765 putative ornithine cyclodeaminase.
       0.741
Tter_0291
TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; KEGG: pau:PA14_57940 RNA polymerase factor sigma-54.
   
    0.687
Tter_1972
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3218 aldo/keto reductase.
   
  
 0.618
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.543
Tter_0838
PFAM: metallophosphoesterase; KEGG: scl:sce2733 bis(5'-nucleosyl)- tetraphosphatase (symmetrical).
       0.536
Tter_2376
Hypothetical protein; KEGG: sat:SYN_00043 gluconate kinase.
   
    0.522
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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