Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_0841PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: pca:Pcar_0765 putative ornithine cyclodeaminase. (317 aa)    
Predicted Functional Partners:
Tter_0839
Alpha,alpha-trehalose-phosphate synthase (UDP- forming); PFAM: glycosyl transferase family 20; KEGG: pca:Pcar_3112 trehalose-6-phosphate synthase.
       0.741
Tter_0840
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
       0.741
Tter_0838
PFAM: metallophosphoesterase; KEGG: scl:sce2733 bis(5'-nucleosyl)- tetraphosphatase (symmetrical).
       0.516
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
       0.409
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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