STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0851PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; Redoxin domain protein; KEGG: mfa:Mfla_0628 electron transport protein SCO1/SenC. (206 aa)    
Predicted Functional Partners:
Tter_1588
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.854
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.815
Tter_0852
KEGG: hypothetical protein.
       0.773
Tter_1492
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bcy:Bcer98_1197 thiol-disulfide oxidoreductase.
 
 
 0.750
Tter_1286
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; NHL repeat containing protein; KEGG: haloacid dehalogenase-like hydrolase family protein.
  
 
 0.622
Tter_0850
Hypothetical protein.
       0.598
Tter_0513
PFAM: protein of unknown function DUF461; KEGG: bbt:BBta_4537 hypothetical protein.
 
   
 0.527
Tter_2080
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aba:Acid345_3927 thioredoxin-like.
  
    0.499
Tter_0853
PFAM: dienelactone hydrolase; KEGG: tgr:Tgr7_1689 hypothetical protein.
       0.484
Tter_0854
PFAM: phosphoribosyltransferase; KEGG: mxa:MXAN_4250 phosphoribosyl transferase domain protein.
       0.484
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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