STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0854PFAM: phosphoribosyltransferase; KEGG: mxa:MXAN_4250 phosphoribosyl transferase domain protein. (219 aa)    
Predicted Functional Partners:
Tter_0853
PFAM: dienelactone hydrolase; KEGG: tgr:Tgr7_1689 hypothetical protein.
     0.994
Tter_0855
PFAM: Abortive infection protein; KEGG: cps:CPS_2226 CAAX amino terminal protease family protein.
       0.613
Tter_0856
KEGG: aba:Acid345_0134 ferredoxin-like.
       0.575
Tter_0851
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; Redoxin domain protein; KEGG: mfa:Mfla_0628 electron transport protein SCO1/SenC.
       0.484
Tter_0852
KEGG: hypothetical protein.
       0.484
Tter_0857
PFAM: PEBP family protein; KEGG: sat:SYN_03131 phosphatidylethanolamine- binding protein.
       0.459
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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