Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_0855PFAM: Abortive infection protein; KEGG: cps:CPS_2226 CAAX amino terminal protease family protein. (210 aa)    
Predicted Functional Partners:
Tter_0856
KEGG: aba:Acid345_0134 ferredoxin-like.
       0.723
Tter_0853
PFAM: dienelactone hydrolase; KEGG: tgr:Tgr7_1689 hypothetical protein.
       0.613
Tter_0854
PFAM: phosphoribosyltransferase; KEGG: mxa:MXAN_4250 phosphoribosyl transferase domain protein.
       0.613
Tter_0857
PFAM: PEBP family protein; KEGG: sat:SYN_03131 phosphatidylethanolamine- binding protein.
       0.520
Tter_1856
PFAM: nitroreductase; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gsu:GSU2525 nitroreductase family protein.
  
  
 0.452
Tter_0218
PFAM: nitroreductase; KEGG: gsu:GSU2525 nitroreductase family protein.
  
  
 0.445
Tter_2170
PFAM: nitroreductase; KEGG: pen:PSEEN3911 nitroreductase.
  
  
 0.445
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
   
  
 0.417
Tter_1438
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
   
  
 0.417
Tter_1853
PFAM: ABC-2 type transporter; KEGG: pmr:PMI0616 ABC transporter, permease protein.
   
  
 0.417
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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