Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0856KEGG: aba:Acid345_0134 ferredoxin-like. (113 aa)    
Predicted Functional Partners:
Tter_1540
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sme:SMc02524 formate dehydrogenase subunit gamma.
 
 
 0.970
Tter_0473
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sus:Acid_3815 glutamate synthase (NADH) small subunit.
   
 
 0.889
Tter_1538
PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: ppd:Ppro_3520 formate dehydrogenase, alpha subunit.
 
 
 0.877
Tter_0860
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.826
Tter_2539
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: sus:Acid_2928 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.826
Tter_1532
KEGG: dds:Ddes_1656 proton-translocating NADH- quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
  
 0.797
Tter_1539
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sat:SYN_00152 NADH:ubiquinone oxidoreductase, NADH-binding subunit.
 
   
 0.790
Tter_0855
PFAM: Abortive infection protein; KEGG: cps:CPS_2226 CAAX amino terminal protease family protein.
       0.723
Tter_0853
PFAM: dienelactone hydrolase; KEGG: tgr:Tgr7_1689 hypothetical protein.
       0.575
Tter_0854
PFAM: phosphoribosyltransferase; KEGG: mxa:MXAN_4250 phosphoribosyl transferase domain protein.
       0.575
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.