STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0868PFAM: glycosyl transferase group 1; KEGG: bcm:Bcenmc03_6048 glycosyl transferase group 1. (419 aa)    
Predicted Functional Partners:
gmhA
Sugar isomerase (SIS); Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
  
 0.900
Tter_0150
PFAM: glycosyl transferase group 1; KEGG: tbd:Tbd_0743 glycosyltransferase.
  
     0.662
Tter_0994
Hypothetical protein.
  
     0.642
Tter_0154
PFAM: sugar isomerase (SIS); KEGG: sus:Acid_2237 sugar isomerase (SIS).
 
  
 0.611
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.565
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.564
Tter_0754
Hypothetical protein.
  
     0.549
Tter_0448
PFAM: glycosyl transferase family 2; KEGG: azo:azo1719 hypothetical protein.
 
    0.521
Tter_0149
PFAM: glycosyl transferase family 9; KEGG: bam:Bamb_5648 glycosyl transferase family protein.
  
 0.518
Tter_0147
PFAM: glycosyl transferase family 9; KEGG: tbd:Tbd_0742 ADP-heptose--LPS heptosyltransferase II.
  
 0.513
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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