STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0875KEGG: sus:Acid_5722 hypothetical protein. (417 aa)    
Predicted Functional Partners:
Tter_0874
Hypothetical protein.
       0.773
Tter_0873
KEGG: scl:sce1452 hypothetical protein.
       0.714
Tter_0876
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mxa:MXAN_2697 HAD-superfamily hydrolase, subfamily IA, variant 3.
       0.613
Tter_1090
PFAM: membrane protein of unknown function; KEGG: bpt:Bpet4762 hypothetical protein.
  
  
 0.519
Tter_2377
PFAM: PspC domain protein; KEGG: cps:CPS_4752 phage shock domain-containing protein.
  
  
 0.501
Tter_2555
PFAM: PspC domain protein; KEGG: hne:HNE_3296 phage shock protein C.
  
  
 0.501
Tter_1257
Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: hypothetical protein; K03969 phage shock protein A.
  
  
 0.496
Tter_1636
PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: ppw:PputW619_4053 peptidase M23B.
   
   0.476
Tter_1855
PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mes:Meso_1800 peptidase M23B.
   
   0.476
Tter_0872
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dol:Dole_1674 tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
       0.462
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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