STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0876TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mxa:MXAN_2697 HAD-superfamily hydrolase, subfamily IA, variant 3. (215 aa)    
Predicted Functional Partners:
Tter_1286
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; NHL repeat containing protein; KEGG: haloacid dehalogenase-like hydrolase family protein.
     0.922
Tter_0045
PFAM: peptidase M22 glycoprotease; KEGG: sfu:Sfum_1786 peptidase M22, glycoprotease.
     0.903
Tter_0752
PFAM: domain of unknown function DUF1730; PBS lyase HEAT domain protein repeat-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein; KEGG: sus:Acid_3576 hypothetical protein.
      0.624
Tter_0874
Hypothetical protein.
       0.613
Tter_0875
KEGG: sus:Acid_5722 hypothetical protein.
       0.613
Tter_2305
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
    
 0.563
Tter_0873
KEGG: scl:sce1452 hypothetical protein.
       0.553
Tter_0689
PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: gsu:GSU1403 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
      0.425
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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