STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0890PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; ATP-grasp domain protein; KEGG: sus:Acid_0167 CoA-binding domain-containing protein. (915 aa)    
Predicted Functional Partners:
Tter_0334
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: glo:Glov_1076 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
 
 
 0.696
Tter_1919
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: scl:sce4004 DeoR family transcriptional regulator.
    
   0.597
Tter_2043
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: cak:Caul_0312 DeoR family transcriptional regulator.
    
   0.597
Tter_2460
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: aba:Acid345_0656 transcriptional regulator, DeoR family.
    
   0.597
Tter_2486
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: mlo:mlr7274 hypothetical protein.
    
   0.597
Tter_2613
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: aba:Acid345_3908 transcriptional regulator, DeoR family.
    
   0.597
Tter_0891
PFAM: protein of unknown function DUF1006; KEGG: cvi:CV_0245 hypothetical protein.
       0.529
Tter_0005
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bha:BH3101 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.506
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.500
Tter_2571
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
  
  
 0.497
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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