STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0898KEGG: scl:sce4299 peptide ABC transporter, ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (359 aa)    
Predicted Functional Partners:
Tter_0897
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component.
 
 0.994
Tter_0420
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rce:RC1_3365 oligopeptide transport system permease protein OppC.
 
 0.987
Tter_0701
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4436 binding-protein-dependent transport systems inner membrane component.
 
 0.987
Tter_2075
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4300 peptide ABC transporter, permease protein.
 
 0.984
Tter_1803
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4487 binding-protein-dependent transport systems inner membrane component.
 
 0.979
Tter_0896
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PA0000261 putative ABC transporter, permease protein.
 
 
 0.963
Tter_2747
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4300 peptide ABC transporter, permease protein.
 
 0.929
Tter_0277
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_02006 lipoprotein releasing system ATP-binding protein LolD.
 
    
0.904
Tter_1439
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU0011 ABC transporter, ATP-binding protein.
 
     
0.885
Tter_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_0451 binding-protein-dependent transport systems inner membrane component.
 
 0.878
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.