STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0905PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amino acid ABC transporter. (256 aa)    
Predicted Functional Partners:
Tter_0904
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_2853 amino acid ABC transporter permease.
 0.999
Tter_0903
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: asa:ASA_1530 ABC-type amino acid transporter, periplasmic binding protein.
 
 0.976
Tter_0587
PFAM: inner-membrane translocator; KEGG: acr:Acry_3094 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.890
Tter_0282
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_2371 ABC transporter, ATPase subunit.
 
     
0.877
Tter_0420
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rce:RC1_3365 oligopeptide transport system permease protein OppC.
    
 0.877
Tter_1320
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
  
 0.866
Tter_0701
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4436 binding-protein-dependent transport systems inner membrane component.
    
 0.865
Tter_2075
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4300 peptide ABC transporter, permease protein.
    
 0.859
Tter_1220
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3318 ABC transporter ATP-binding protein.
 
    
0.740
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
  
  
 0.630
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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