STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0944PFAM: glycosyl transferase family 39; KEGG: xop:PXO_04470 dolichyl-phosphate-mannose- protein mannosyltransferase. (1391 aa)    
Predicted Functional Partners:
Tter_0082
PFAM: amine oxidase; KEGG: psp:PSPPH_0963 hypothetical protein.
 
    0.903
Tter_0945
Uncharacterized membrane protein-like protein.
 
    
0.835
Tter_1036
Membrane-bound mannosyltransferase-like protein; KEGG: bba:Bd1123 putative membrane-bound mannosyltransferase.
 
     0.813
Tter_1038
PFAM: conserved hypothetical protein; KEGG: gur:Gura_2685 hypothetical protein.
 
  
 0.790
Tter_1657
PFAM: conserved hypothetical protein; KEGG: gme:Gmet_1389 hypothetical protein.
 
  
 0.774
Tter_0803
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bha:BH0078 stage II sporulation protein E.
  
     0.712
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.701
Tter_1692
PFAM: Translin; KEGG: translin family protein.
  
     0.689
Tter_1391
Putative transcriptional regulator; PFAM: AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: xca:xccb100_0556 hypothetical protein.
 
    0.668
Tter_1816
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bar:GBAA0439 hypothetical protein.
  
     0.653
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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