STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0991PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bcr:BCAH187_A3910 serine/threonine protein kinase. (551 aa)    
Predicted Functional Partners:
Tter_1427
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: mxa:MXAN_4648 FHA domain protein.
 
 
 
 0.998
Tter_1426
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: dac:Daci_0865 FHA domain-containing protein.
 
 
 
 0.996
Tter_1682
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: glo:Glov_1588 protein serine/threonine phosphatase.
 
 0.990
Tter_0385
KEGG: xca:xccb100_3125 serine/threonine phosphoprotein phosphatase.
  
 
 0.959
Tter_0903
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: asa:ASA_1530 ABC-type amino acid transporter, periplasmic binding protein.
 
  
 0.860
Tter_0990
Hypothetical protein.
     
 0.780
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.773
Tter_1124
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat- containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
  
 
 0.715
Tter_2859
PFAM: transcriptional activator domain; TPR repeat- containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
  
 
 0.705
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
    0.683
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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