STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1038PFAM: conserved hypothetical protein; KEGG: gur:Gura_2685 hypothetical protein. (341 aa)    
Predicted Functional Partners:
Tter_1036
Membrane-bound mannosyltransferase-like protein; KEGG: bba:Bd1123 putative membrane-bound mannosyltransferase.
 
     0.890
uppP
Undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
  
 0.796
Tter_0944
PFAM: glycosyl transferase family 39; KEGG: xop:PXO_04470 dolichyl-phosphate-mannose- protein mannosyltransferase.
 
  
 0.787
Tter_0945
Uncharacterized membrane protein-like protein.
 
  
 0.705
Tter_0082
PFAM: amine oxidase; KEGG: psp:PSPPH_0963 hypothetical protein.
 
    0.696
Tter_1037
KEGG: bcr:BCAH187_A5609 hypothetical protein.
       0.682
rex
CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.668
Tter_0232
KEGG: glo:Glov_2744 hypothetical protein.
 
     0.656
Tter_1791
PFAM: conserved hypothetical protein; KEGG: noc:Noc_1947 hypothetical protein.
  
     0.579
Tter_1099
KEGG: sus:Acid_1474 hypothetical protein.
  
     0.486
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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