STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1042PFAM: glycosyl transferase group 1; KEGG: dps:DP2455 hypothetical protein. (339 aa)    
Predicted Functional Partners:
Tter_0432
PFAM: Amylo-alpha-16-glucosidase; KEGG: aba:Acid345_3259 amylo-alpha-1,6-glucosidase.
 
 0.956
Tter_1041
TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sus:Acid_5660 FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
  
    0.781
Tter_2118
KEGG: sus:Acid_0204 glycogen debranching enzyme- like protein.
 
 
 0.725
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.565
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.564
Tter_1043
KEGG: mfa:Mfla_0320 protein serine/threonine phosphatases.
  
    0.544
Tter_1842
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase.
  
  
 0.509
Tter_1044
TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bat:BAS4827 phosphatase; Belongs to the HAD-like hydrolase superfamily.
       0.472
Tter_0868
PFAM: glycosyl transferase group 1; KEGG: bcm:Bcenmc03_6048 glycosyl transferase group 1.
  
     0.461
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.