STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1061PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 hydrolase, NUDIX family; Belongs to the Nudix hydrolase family. (179 aa)    
Predicted Functional Partners:
Tter_1063
KEGG: bha:BH3249 nicotinate phosphoribosyltransferase.
     
 0.786
Tter_1062
KEGG: ccv:CCV52592_0502 cytoplasmic membrane protein.
  
    0.784
Tter_1203
PFAM: NUDIX hydrolase; KEGG: sus:Acid_7717 NUDIX hydrolase.
  
     0.751
Tter_1416
PFAM: NUDIX hydrolase; KEGG: hch:HCH_10012 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
  
     0.715
Tter_2856
PFAM: NUDIX hydrolase; KEGG: bbt:BBta_3942 putative NUDIX-like hydrolase; Belongs to the Nudix hydrolase family.
  
     0.703
Tter_1060
PFAM: GCN5-related N-acetyltransferase; KEGG: rpi:Rpic_4740 GCN5-related N- acetyltransferase.
  
    0.472
Tter_1059
PFAM: molybdopterin binding domain; KEGG: sus:Acid_1567 competence/damage-inducible protein CinA; Belongs to the CinA family.
       0.465
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.422
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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