STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1081PFAM: aldo/keto reductase; KEGG: pca:Pcar_0309 aldo/keto reductase family oxidoreductase. (286 aa)    
Predicted Functional Partners:
Tter_2256
PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU1620 iron-sulfur cluster binding protein, putative.
  
   0.618
Tter_1082
PFAM: TspO/MBR family protein; KEGG: azc:AZC_2432 tryptophan-rich sensory protein.
       0.563
Tter_2519
KEGG: tbd:Tbd_0735 hypothetical protein.
  
     0.528
Tter_1708
PFAM: ExsB family protein; KEGG: afw:Anae109_2271 hypothetical protein.
 
    0.519
Tter_1404
PFAM: protein of unknown function DUF111; KEGG: mxa:MXAN_6689 hypothetical protein; Belongs to the LarC family.
 
    0.435
Tter_1083
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: aba:Acid345_2951 transcriptional regulator, MarR family.
       0.415
Tter_1677
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: sat:SYN_00474 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit.
 
    0.409
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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