STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1103PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1065 hypothetical protein. (323 aa)    
Predicted Functional Partners:
Tter_1102
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein.
 
  0.990
Tter_1101
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein.
 
 
  0.982
Tter_1991
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein.
 
  0.963
Tter_1990
PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein.
 
 
  0.953
Tter_1094
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
  
 
0.905
Tter_1104
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reh:H16_B1876 transcriptional regulator.
 
     0.572
Tter_1100
PFAM: FG-GAP repeat protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: bha:BH1116 hypothetical protein.
 
     0.561
Tter_1502
PFAM: protein of unknown function DUF624; KEGG: bsu:BSU30090 hypothetical protein.
 
    0.517
Tter_2642
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase.
 
    0.416
Tter_0201
PFAM: Acetyl xylan esterase; KEGG: mlo:mlr6993 acetyl xylan esterase.
 
     0.402
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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