Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_1112PFAM: Xylose isomerase domain protein TIM barrel; KEGG: swi:Swit_1902 xylose isomerase domain- containing protein. (259 aa)    
Predicted Functional Partners:
Tter_1113
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_3552 hypothetical protein.
 
     0.904
Tter_1114
PFAM: 3D domain protein; KEGG: gur:Gura_1160 hypothetical protein.
       0.741
Tter_0323
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ypk:y0252 hypothetical protein.
  
     0.710
Tter_0621
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sfu:Sfum_1980 xylose isomerase domain protein TIM barrel.
  
     0.704
Tter_0895
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_1577 xylose isomerase domain- containing protein.
  
     0.685
Tter_1909
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_2233 xylose isomerase domain- containing protein.
  
     0.618
Tter_2666
KEGG: atc:AGR_L_146 hypothetical protein.
  
     0.608
Tter_1907
KEGG: hypothetical protein.
  
     0.591
Tter_1924
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mno:Mnod_3088 hydroxypyruvate isomerase; Belongs to the hyi family.
 
     0.586
Tter_1807
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rec:RHECIAT_PC0000985 putative xylose isomerase domain protein.
  
     0.573
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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