Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Tter_1114PFAM: 3D domain protein; KEGG: gur:Gura_1160 hypothetical protein. (1063 aa)    
Predicted Functional Partners:
Tter_1113
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_3552 hypothetical protein.
       0.773
Tter_1112
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: swi:Swit_1902 xylose isomerase domain- containing protein.
       0.741
Tter_1060
PFAM: GCN5-related N-acetyltransferase; KEGG: rpi:Rpic_4740 GCN5-related N- acetyltransferase.
  
     0.564
Tter_1115
KEGG: acp:A2cp1_4045 hypothetical protein.
       0.502
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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