STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1121PFAM: transcriptional regulator PadR family protein; KEGG: bch:Bcen2424_0122 PadR-like family transcriptional regulator. (202 aa)    
Predicted Functional Partners:
Tter_1122
KEGG: ank:AnaeK_4022 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.805
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
       0.698
Tter_2728
KEGG: afw:Anae109_3510 hypothetical protein.
  
     0.612
Tter_1095
PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter.
  
     0.575
Tter_2526
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr2244 sugar binding protein of sugar ABC transporter.
  
     0.545
Tter_1120
Hypothetical protein.
       0.543
Tter_2681
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_3856 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.539
Tter_1450
Hypothetical protein.
  
     0.469
Tter_1119
Hypothetical protein.
       0.465
Tter_1921
PFAM: protein of unknown function DUF1470; KEGG: bcy:Bcer98_2131 hypothetical protein.
  
     0.433
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.