STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1141PFAM: VWA containing CoxE family protein; KEGG: pla:Plav_2958 VWA containing CoxE family protein. (415 aa)    
Predicted Functional Partners:
Tter_1142
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMc00515 hypothetical protein.
 
     0.948
Tter_1140
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sus:Acid_2226 xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
   
 0.899
Tter_2235
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bja:bll5666 hypothetical protein.
 
     0.804
Tter_2233
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rru:Rru_A0966 xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
   
 0.789
Tter_2232
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bbt:BBta_2635 carbon monoxide dehydrogenase medium subunit.
 
     0.787
Tter_1143
PFAM: PKD domain containing protein; coagulation factor 5/8 type domain protein; SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: hypothetical protein.
       0.518
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.