STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1175PFAM: Methyltransferase type 12; Methyltransferase type 11; UbiE/COQ5 methyltransferase; KEGG: mlo:mlr9730 N-methyltransferase-like protein. (245 aa)    
Predicted Functional Partners:
Tter_1176
PFAM: O-antigen polymerase; KEGG: aba:Acid345_2587 O-antigen polymerase.
       0.737
Tter_1177
PFAM: sulfotransferase; KEGG: rde:RD1_3840 hypothetical protein.
 
     0.656
Tter_1173
PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A1051 putative transferase.
       0.578
Tter_1174
Hypothetical protein.
       0.578
Tter_1172
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: aba:Acid345_0895 NAD-dependent epimerase/dehydratase.
  
    0.430
Tter_1170
TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: ftf:FTF0666c methylpurine-DNA glycosylase family protein; Belongs to the DNA glycosylase MPG family.
       0.428
Tter_1171
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
       0.428
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.