STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1176PFAM: O-antigen polymerase; KEGG: aba:Acid345_2587 O-antigen polymerase. (433 aa)    
Predicted Functional Partners:
Tter_1842
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase.
  
  
 0.839
Tter_2801
PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_2352 glycosyl transferase family protein.
 
  
 0.835
Tter_2800
PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_2352 glycosyl transferase family protein.
 
   
 0.789
Tter_1173
PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A1051 putative transferase.
 
  
 0.751
Tter_1175
PFAM: Methyltransferase type 12; Methyltransferase type 11; UbiE/COQ5 methyltransferase; KEGG: mlo:mlr9730 N-methyltransferase-like protein.
       0.737
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.597
Tter_1177
PFAM: sulfotransferase; KEGG: rde:RD1_3840 hypothetical protein.
       0.581
Tter_1174
Hypothetical protein.
       0.552
Tter_1171
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
   
 0.546
Tter_0250
KEGG: rec:RHECIAT_CH0003316 hypothetical protein.
  
     0.441
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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