STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1177PFAM: sulfotransferase; KEGG: rde:RD1_3840 hypothetical protein. (325 aa)    
Predicted Functional Partners:
Tter_0990
Hypothetical protein.
  
     0.671
Tter_0405
PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL110512 hypothetical protein.
  
   
 0.657
Tter_1175
PFAM: Methyltransferase type 12; Methyltransferase type 11; UbiE/COQ5 methyltransferase; KEGG: mlo:mlr9730 N-methyltransferase-like protein.
 
     0.656
Tter_1176
PFAM: O-antigen polymerase; KEGG: aba:Acid345_2587 O-antigen polymerase.
       0.581
Tter_1171
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
     0.444
Tter_1173
PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A1051 putative transferase.
       0.427
Tter_0755
TIGRFAM: anti-sigma factor; KEGG: tgr:Tgr7_1713 putative transmembrane anti- sigma factor.
  
     0.418
Tter_1921
PFAM: protein of unknown function DUF1470; KEGG: bcy:Bcer98_2131 hypothetical protein.
  
     0.418
Tter_1174
Hypothetical protein.
       0.415
Tter_0574
KEGG: psb:Psyr_1541 hypothetical protein.
  
     0.405
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.