Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_1208PFAM: phospholipase/Carboxylesterase; KEGG: pfo:Pfl01_2066 phospholipase/carboxylesterase. (223 aa)    
Predicted Functional Partners:
Tter_1209
PFAM: Integral membrane protein TerC; KEGG: sfu:Sfum_3512 integral membrane protein TerC.
       0.752
Tter_2319
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3759 ABC transporter.
 
    0.589
Tter_1210
KEGG: gur:Gura_2950 poly-gamma-glutamate biosynthesis protein.
       0.523
Tter_1207
PFAM: ErfK/YbiS/YcfS/YnhG family protein; SMART: Beta-propeller repeat TECPR; KEGG: beta-propeller repeat TECPR.
       0.511
Tter_2648
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: mgm:Mmc1_2016 helicase domain protein.
   
 
 0.422
Tter_0993
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 
 0.405
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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