Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_1209PFAM: Integral membrane protein TerC; KEGG: sfu:Sfum_3512 integral membrane protein TerC. (249 aa)    
Predicted Functional Partners:
Tter_1208
PFAM: phospholipase/Carboxylesterase; KEGG: pfo:Pfl01_2066 phospholipase/carboxylesterase.
       0.752
Tter_1210
KEGG: gur:Gura_2950 poly-gamma-glutamate biosynthesis protein.
       0.536
Tter_1207
PFAM: ErfK/YbiS/YcfS/YnhG family protein; SMART: Beta-propeller repeat TECPR; KEGG: beta-propeller repeat TECPR.
       0.498
Tter_1584
PFAM: UspA domain protein; KEGG: sfu:Sfum_0641 UspA domain protein.
 
     0.407
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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