STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1220PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3318 ABC transporter ATP-binding protein. (262 aa)    
Predicted Functional Partners:
Tter_1221
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4400 putative transmembrane component of ABC transporter.
  
 0.984
Tter_0403
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0643 putative transport system permease protein.
  
 0.963
Tter_1222
PFAM: NMT1/THI5 like domain protein; KEGG: bcy:Bcer98_0371 NMT1/THI5-like domain- containing protein.
  
 0.963
Tter_2226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 aliphatic sulfonate ABC transporter permease.
  
 0.903
Tter_0231
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7951 ABC transporter, permease.
  
 0.886
Tter_1320
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    0.863
Tter_0402
PFAM: NMT1/THI5 like domain protein; KEGG: rpb:RPB_3120 twin-arginine translocation pathway signal.
 
  
 0.833
Tter_0229
PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: rpd:RPD_2108 extracellular solute-binding protein.
 
  
 0.808
Tter_0905
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amino acid ABC transporter.
 
    
0.740
Tter_2328
TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cja:CJA_2241 sulfate ABC transporter, permease protein CysW.
 
 
    0.724
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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