STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1222PFAM: NMT1/THI5 like domain protein; KEGG: bcy:Bcer98_0371 NMT1/THI5-like domain- containing protein. (360 aa)    
Predicted Functional Partners:
Tter_1221
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4400 putative transmembrane component of ABC transporter.
  
 0.970
Tter_1220
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3318 ABC transporter ATP-binding protein.
  
 0.963
Tter_0403
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0643 putative transport system permease protein.
  
 0.856
Tter_0231
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7951 ABC transporter, permease.
 
  
 0.816
thiE-2
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.494
Tter_0230
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt2573 putative ATP-binding ABC transporter protein.
 
  
 0.487
Tter_2227
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
  
 0.487
Tter_2226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 aliphatic sulfonate ABC transporter permease.
  
  
 0.443
Tter_1219
PFAM: inositol monophosphatase; KEGG: dal:Dalk_1246 inositol-phosphate phosphatase.
       0.426
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
   
  
 0.425
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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