STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1226TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: acp:A2cp1_4094 thioredoxin reductase. (325 aa)    
Predicted Functional Partners:
Tter_0984
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: apa:APP7_1136 thioredoxin; Belongs to the thioredoxin family.
 
 0.995
Tter_2049
TIGRFAM: glutaredoxin-like domain protein; PFAM: Thioredoxin domain; KEGG: ank:AnaeK_2804 glutaredoxin-like domain protein.
 
  
 0.918
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.916
Tter_2737
Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: eba:ebA4598 cystathionine beta-lyase, putative, gene: MetC.
   
 
 0.913
Tter_1696
TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sus:Acid_7702 cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.910
Tter_2727
Dehydrogenase, selenocysteine-containing protein; Contains selenocysteine.
 
  
 0.863
Tter_1225
TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: sat:SYN_01522 thiamin pyrophosphokinase.
       0.777
Tter_1224
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.769
Tter_1313
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; thiamineS protein; KEGG: sus:Acid_0755 UBA/ThiF-type NAD/FAD binding protein.
  
  
 0.704
Tter_1286
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; NHL repeat containing protein; KEGG: haloacid dehalogenase-like hydrolase family protein.
  
 
 0.687
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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