STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1247TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: afw:Anae109_0367 phospho-2-dehydro-3- deoxyheptonate aldolase. (345 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
 
 0.979
pheA
PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: mgm:Mmc1_1881 prephenate dehydratase.
 
  
 0.920
Tter_2065
TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: afw:Anae109_0367 phospho-2-dehydro-3- deoxyheptonate aldolase.
  
  
 
0.900
Tter_0415
PFAM: Transketolase central region; Transketolase domain protein; KEGG: scl:sce8467 transketolase.
  
 
 0.837
Tter_1527
PFAM: Transketolase central region; Transketolase domain protein; KEGG: gur:Gura_0492 transketolase, central region.
    
  0.809
Tter_1528
PFAM: Transketolase domain protein; KEGG: rpc:RPC_3879 transketolase-like.
    
  0.809
Tter_2456
PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: rru:Rru_A1345 fructose-bisphosphate aldolase.
     
  0.800
trpC
PFAM: Indole-3-glycerol phosphate synthase; KEGG: ade:Adeh_4055 indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
  
 0.726
trpF
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: gur:Gura_1736 N-(5'- phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
  
  
 0.710
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.704
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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